With a bit closer look it seems this is more serious than I thought: it's not only a bug but a security bug.
Under certain circumstances restarting unbound (which as noted happens with every Edit Hosts &c) can lead to loss of data as well as result in data leaks outside the firewall.
As it is now, at unbound startup there's a time window when it gives wrong answers to DNS queries. NXDOMAIN is bad enough and can lead to data loss in several circumstances, but as it starts forwarders before populating local hosts it can also return wrong answers in split DNS situations, that is, return external IP when it should return the internal one. This is obviously bad if exernal DNS server is compromised or spoofed, but even when it isn't, connections intended to intranet machines could go outside when they shouldn't.
Exploiting this deliberately is not all that simple and all really bad cases I can think of require split DNS setup and knowledge or ability to guess when unbound is restarted, but some attacks could be set up to wait for it.
If this list is not the right place for discussing about bugs, please redirect wherever appropriate.